4U13

Crystal structure of putative polyketide cyclase (protein SMa1630) from Sinorhizobium meliloti at 2.3 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.193 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal structure of a putative polyketide cyclase (protein SMa1630) from Sinorhizobium meliloti at 2.3 A resolution

Shabalin, I.G.Bacal, P.Osinski, T.Cooper, D.R.Szlachta, K.Stead, M.Grabowski, M.Hammonds, J.Ahmed, M.Hillerich, B.S.Bonanno, J.Seidel, R.Almo, S.C.Minor, W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
putative polyketide cyclase SMa1630
A, B
109Rhizobium meliloti (strain 1021)Mutation(s): 0 
Find proteins for Q92YJ1 (Rhizobium meliloti (strain 1021))
Go to UniProtKB:  Q92YJ1
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 47.764α = 90.00
b = 42.295β = 111.83
c = 62.287γ = 90.00
Software Package:
Software NamePurpose
HKL-3000data reduction
Cootmodel building
REFMACrefinement
HKL-3000phasing
HKL-3000data collection
HKL-3000data scaling
PHENIXphasing
SCALEPACKdata scaling
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical SciencesUnited StatesNIH-5U54GM094662-04

Revision History 

  • Version 1.0: 2014-09-10
    Type: Initial release
  • Version 1.1: 2014-09-24
    Type: Refinement description, Structure summary
  • Version 1.2: 2015-08-26
    Type: Data collection
  • Version 1.3: 2017-09-20
    Type: Author supporting evidence, Derived calculations, Refinement description