4TYH

Ternary complex of P38 and MK2 with a P38 inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3 Å
  • R-Value Free: 0.313 
  • R-Value Work: 0.228 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Discovery of substrate selective, ATP-competitive P38 alpha MAP kinase inhibitors

Cumming, J.G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
MAP kinase-activated protein kinase 2
A
350Homo sapiensGene Names: MAPKAPK2
EC: 2.7.11.1
Find proteins for P49137 (Homo sapiens)
Go to Gene View: MAPKAPK2
Go to UniProtKB:  P49137
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Mitogen-activated protein kinase 14
B
348Mus musculusGene Names: Mapk14 (Crk1, Csbp1, Csbp2)
EC: 2.7.11.24
Find proteins for P47811 (Mus musculus)
Go to UniProtKB:  P47811
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
39G
Query on 39G

Download SDF File 
Download CCD File 
B
N-[5-(dimethylsulfamoyl)-2-methylphenyl]-1-phenyl-5-propyl-1H-pyrazole-4-carboxamide
C22 H26 N4 O3 S
MOBKKWWSLMVASV-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
39GIC50: 61 - >10000 nM (99) BINDINGDB
39GKd: 15400 nM (99) BINDINGDB
39GKi: 14 nM (99) BINDINGDB
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3 Å
  • R-Value Free: 0.313 
  • R-Value Work: 0.228 
  • Space Group: P 41 21 2
Unit Cell:
Length (Å)Angle (°)
a = 87.726α = 90.00
b = 87.726β = 90.00
c = 229.876γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-07-22
    Type: Initial release