4TYF

Structure of a Metallo-beta-lactamase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.173 
  • R-Value Work: 0.150 

wwPDB Validation 3D Report Full Report


This is version 2.0 of the entry. See complete history

Literature

Structure of a Metallo-beta-lactamase

Ferguson, J.A.Makena, A.Brem, J.McDonough, M.A.Schofield, C.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
NDM-4
A
231Escherichia coliGene Names: bla(NDM-4) (blaNDM-4, NDM-4)
Find proteins for H6WZS9 (Escherichia coli)
Go to UniProtKB:  H6WZS9
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.173 
  • R-Value Work: 0.150 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 41.700α = 90.00
b = 59.080β = 97.61
c = 42.000γ = 90.00
Software Package:
Software NamePurpose
XDSdata reduction
PHENIXrefinement
Cootmodel building
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationCountryGrant Number
Medical Research Council (United Kingdom)United KingdomG1100135

Revision History 

  • Version 1.0: 2015-07-15
    Type: Initial release
  • Version 2.0: 2017-09-13
    Type: Advisory, Atomic model, Author supporting evidence, Data collection, Derived calculations