Download MendeleyStructure of tau peptide in complex with Tau5 antibody Fab fragment
Cehlar, O., Skrabana, R., Novak, M.To be published.
4TQE
Structure of tau peptide in complex with Tau5 antibody Fab fragment
- PDB DOI: 10.2210/pdb4TQE/pdb
- Classification: IMMUNE SYSTEM
- Organism(s): Mus musculus, Homo sapiens
- Mutation(s): No
- Deposited: 2014-06-11 Released: 2015-07-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.197
- R-Value Work: 0.151
- R-Value Observed: 0.153
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| If kappa light chain | A [auth L] | 218 | Mus musculus | Mutation(s): 0 Gene Names: Igkc, Igk-C |  |
UniProt | |||||
Find proteins for A2NHM3 (Mus musculus) Explore A2NHM3 Go to UniProtKB: A2NHM3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A2NHM3 | ||||
Protein Feature ViewExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Fab heavy chain | B [auth H] | 222 | Mus musculus | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Protein Feature ViewExpand | |||||
| |||||
Find similar proteins by: Sequence | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Microtubule-associated protein tau | C [auth A] | 16 | Homo sapiens | Mutation(s): 0 Gene Names: MAPT, MAPTL, MTBT1, TAU |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P10636 (Homo sapiens) Explore P10636 Go to UniProtKB: P10636 | |||||
PHAROS: P10636 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P10636 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PGE Query on PGE | M [auth H] | TRIETHYLENE GLYCOL C6 H14 O4 ZIBGPFATKBEMQZ-UHFFFAOYSA-N |  | Ligand Interaction | |
| SO4 Query on SO4 | D [auth L], E [auth L], F [auth L], G [auth L], K [auth H] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | Ligand Interaction | |
| NA Query on NA | H [auth L], I [auth L], J [auth L], L [auth H] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.197
- R-Value Work: 0.151
- R-Value Observed: 0.153
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 124.865 | α = 90 |
| b = 59.732 | β = 112.76 |
| c = 71.041 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| PHASER | phasing |
| XSCALE | data scaling |
Entry History
Deposition Data
- Released Date: 2015-07-29 Deposition Author(s): Cehlar, O., Skrabana, R., Novak, M.
Revision History (Full details and data files)
- Version 1.0: 2015-07-29
Type: Initial release - Version 1.1: 2018-03-07
Changes: Data collection
