Crystal structure of R2 pyocin membrane-piercing spike
Browning, C.B., Leiman, P.G., Shneider, M.M.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Phage baseplate protein | 185 | Pseudomonas aeruginosa | Mutation(s): 0  Gene Names: VR2, gpV, D480_28305, JF43_02945, NCGM1900_0632, NCGM1984_0630 | ||
UniProt | |||||
Find proteins for Q9S581 (Pseudomonas aeruginosa) Explore Q9S581  Go to UniProtKB:  Q9S581 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9S581 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PGE Query on PGE | WA [auth H] | TRIETHYLENE GLYCOL C6 H14 O4 ZIBGPFATKBEMQZ-UHFFFAOYSA-N | |||
SO4 Query on SO4 | AA [auth C] AC [auth O] BA [auth C] BC [auth O] CC [auth O] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
EDO Query on EDO | DA [auth D] MA [auth F] MB [auth K] RA [auth G] RB [auth L] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CA Query on CA | AB [auth H] DC [auth O] GA [auth D] JB [auth J] PA [auth F] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
CL Query on CL | BB [auth H] CA [auth C] CB [auth H] EB [auth I] EC [auth O] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 94.945 | α = 90 |
b = 137.471 | β = 106.56 |
c = 164.759 | γ = 90 |
Software Name | Purpose |
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RemDAq | data collection |
PHASER | phasing |
PHENIX | refinement |
XDS | data reduction |
SCALA | data scaling |