4S36

Crystal structure of the C-terminal domain of R2 pyocin membrane-piercing spike


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.46 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.149 

wwPDB Validation 3D Report Full Report


This is version 2.1 of the entry. See complete history

Literature

Crystal structure of the C-terminal domain of R2 pyocin membrane-piercing spike

Browning, C.B.Leiman, P.G.Shneider, M.M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Phage baseplate protein
A
90Pseudomonas aeruginosaMutation(s): 0 
Gene Names: VR2
Find proteins for Q9S581 (Pseudomonas aeruginosa)
Go to UniProtKB:  Q9S581
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FE
Query on FE

Download SDF File 
Download CCD File 
A
FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.46 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.149 
  • Space Group: P 63 2 2
Unit Cell:
Length (Å)Angle (°)
a = 46.205α = 90.00
b = 46.205β = 90.00
c = 144.954γ = 120.00
Software Package:
Software NamePurpose
SCALAdata scaling
XDSdata reduction
RemDAqdata collection
PHENIXrefinement
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-01-27
    Type: Initial release
  • Version 1.1: 2016-02-03
    Type: Derived calculations
  • Version 2.0: 2017-07-12
    Type: Advisory, Atomic model, Database references, Derived calculations
  • Version 2.1: 2017-11-22
    Type: Refinement description