4RZ7

Crystal Structure of PVX_084705 with bound PCI32765


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.238 
  • R-Value Work: 0.194 
  • R-Value Observed: 0.196 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Crystal Structure of PVX_084705 with bound PCI32765

Jiang, D.Q.Tempel, W.Loppnau, P.Graslund, S.He, H.Seitova, A.Arrowsmith, C.H.Edwards, A.M.Bountra, C.Hui, R.Hutchinson, A.El Bakkouri, M.Amani, M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
cGMP-dependent protein kinase, putative
A
847Plasmodium vivax Sal-1Mutation(s): 0 
Gene Names: PVX_084705
Find proteins for A5K0N4 (Plasmodium vivax (strain Salvador I))
Go to UniProtKB:  A5K0N4
Protein Feature View
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
1E8
Query on 1E8

Download CCD File 
A
1-{(3R)-3-[4-amino-3-(4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl}prop-2-en-1-one
C25 H24 N6 O2
XYFPWWZEPKGCCK-GOSISDBHSA-N
 Ligand Interaction
UNX
Query on UNX

Download CCD File 
A
UNKNOWN ATOM OR ION
X
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.238 
  • R-Value Work: 0.194 
  • R-Value Observed: 0.196 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 192.556α = 90
b = 117.422β = 95.26
c = 68.219γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing
PHENIXrefinement
PDB_EXTRACTdata extraction
APSdata collection
HKL-3000data reduction
HKL-3000data scaling

Structure Validation

View Full Validation Report



Entry History 

Revision History 

  • Version 1.0: 2015-01-14
    Type: Initial release
  • Version 1.1: 2015-03-11
    Changes: Non-polymer description
  • Version 1.2: 2015-06-24
    Changes: Database references, Structure summary
  • Version 1.3: 2015-07-22
    Changes: Structure summary
  • Version 1.4: 2017-11-22
    Changes: Advisory, Refinement description