4RU2

Crystal structure of a RNA-binding protein 39 (RBM39) in complex with fragment of splicing factor (U2AF) from Mus musculus at 2.20 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.204 
  • R-Value Work: 0.174 
  • R-Value Observed: 0.176 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal structure of a RNA-binding protein 39 (RBM39) in complex with fragment of splicing factor (U2AF) from Mus musculus at 2.20 A resolution

Joint Center for Structural Genomics (JCSG)Partnership for T-Cell Biology (TCELL)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Splicing factor U2AF 65 kDa subunit
B, D, F, H, J, L, N, P, R
29Mus musculusMutation(s): 0 
Gene Names: U2af2U2af65WT4514D
Find proteins for P26369 (Mus musculus)
Go to UniProtKB:  P26369
Protein Feature View
  • Reference Sequence

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
RNA-binding protein 39 (RBM39)
A, C, E, G, I, K, M, O, Q
114Mus musculusMutation(s): 1 
Gene Names: CaperRbm39Rnpc2WS20613E
Find proteins for Q8VH51 (Mus musculus)
Go to UniProtKB:  Q8VH51
Protein Feature View
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.204 
  • R-Value Work: 0.174 
  • R-Value Observed: 0.176 
  • Space Group: P 32
  • Diffraction Data DOI: 10.18430/M34RU2 Protein Diffraction
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 127.283α = 90
b = 127.283β = 90
c = 78.864γ = 120
Software Package:
Software NamePurpose
MolProbitymodel building
PDB_EXTRACTdata extraction
PHASERphasing
XSCALEdata scaling
BUSTER-TNTrefinement
XDSdata reduction
BUSTERrefinement

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-02-04
    Type: Initial release
  • Version 1.1: 2017-11-22
    Changes: Refinement description