4RE7

Lambda-[Ru(TAP)2(dppz)]2+ bound to d(TCIGCGCCGA)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.181 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.193 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The effects of DNA modification on the binding of polypyridyl ruthenium complexes

Hall, J.P.Gurung, S.P.Beer, H.Buchner, K.Cardin, D.J.Brazier, J.A.Cardin, C.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsLengthOrganism
5'-D(*TP*CP*IP*GP*CP*GP*CP*CP*GP*A)-3'A10synthetic construct
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
BA
Query on BA

Download SDF File 
Download CCD File 
A
BARIUM ION
Ba
XDFCIPNJCBUZJN-UHFFFAOYSA-N
 Ligand Interaction
RKL
Query on RKL

Download SDF File 
Download CCD File 
A
Ru(tap)2(dppz) complex
C38 H22 N12 Ru
PIKVAZQLFXBUSD-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.181 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.193 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 47.830α = 90.00
b = 47.830β = 90.00
c = 32.110γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
SHELXEmodel building
PHENIXrefinement
SHELXCDphasing
GDAdata collection
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-09-30
    Type: Initial release
  • Version 1.1: 2017-11-22
    Type: Refinement description