4QXF

crystal structure of human LGR4 and Rspo1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.213 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

crystal structure of human LGR4 and Rspo1

Xu, J.G.Huang, C.Zhou, Y.Zhu, Y.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Leucine-rich repeat-containing G-protein coupled receptor 4, Variable lymphocyte receptor B
A, B
301Eptatretus burgeriHomo sapiens
This entity is chimeric
Mutation(s): 1 
Gene Names: VLRB, LGR4 (GPR48)
Find proteins for Q4G1L2 (Eptatretus burgeri)
Go to UniProtKB:  Q4G1L2
Find proteins for Q9BXB1 (Homo sapiens)
Go to Gene View: LGR4
Go to UniProtKB:  Q9BXB1
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
R-spondin-1
E, C
102Homo sapiensMutation(s): 0 
Gene Names: RSPO1
Find proteins for Q2MKA7 (Homo sapiens)
Go to Gene View: RSPO1
Go to UniProtKB:  Q2MKA7
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.213 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 44.867α = 90.00
b = 137.913β = 100.13
c = 82.560γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data reduction
PHASESphasing
ADSCdata collection
HKL-2000data scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-10-08
    Type: Initial release
  • Version 1.1: 2017-08-02
    Type: Refinement description, Source and taxonomy