4QNN

Crystal Structure of phospholipase A 1 from hornet(Vespa basalis) venom


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.279 
  • R-Value Work: 0.204 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of phospholipase A 1 from hornet(Vespa basalis) venom

Chuang, C.Y.Ko, T.P.Wang, A.H.J.Hou, M.H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Phospholipase A 1 from hornet(Vespa basalis) venom
A, B, C, D
300Vespa basalisMutation(s): 0 
EC: 3.1.1.32
Find proteins for A0A0M3KKW3 (Vespa basalis)
Go to UniProtKB:  A0A0M3KKW3
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A, B, C, D
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
HG
Query on HG

Download SDF File 
Download CCD File 
A, B, C
MERCURY (II) ION
Hg
BQPIGGFYSBELGY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.279 
  • R-Value Work: 0.204 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 57.276α = 107.14
b = 70.147β = 109.99
c = 81.724γ = 100.90
Software Package:
Software NamePurpose
REFMACphasing
HKL-2000data collection
HKL-2000data reduction
HKL-2000data scaling
REFMACrefinement
CNSrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-06-24
    Type: Initial release
  • Version 1.1: 2018-03-07
    Type: Data collection