4QM1

Crystal Structure of the Inosine 5'-monophosphate Dehydrogenase with an Internal Deletion of the CBS Domain from Bacillus anthracis str. Ames complexed with inhibitor D67


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7964 Å
  • R-Value Free: 0.248 
  • R-Value Work: 0.192 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal Structure of the Inosine 5'-monophosphate Dehydrogenase with an Internal Deletion of the CBS Domain from Bacillus anthracis str. Ames complexed with inhibitor D67

Kim, Y.Makowska-Grzyska, M.Gu, M.Mandapati, K.Gollapalli, D.Gorla, S.K.Zhang, M.Hedstrom, L.Anderson, W.F.Joachimiak, A.CSGID

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Inosine-5'-monophosphate dehydrogenase
A, B, C, D
384Bacillus anthracisMutation(s): 0 
Gene Names: guaB
EC: 1.1.1.205
Find proteins for A0A0J1HJU0 (Bacillus anthracis)
Go to UniProtKB:  A0A0J1HJU0
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
IMP
Query on IMP

Download SDF File 
Download CCD File 
A, B, C, D
INOSINIC ACID
C10 H13 N4 O8 P
GRSZFWQUAKGDAV-KQYNXXCUSA-N
 Ligand Interaction
39H
Query on 39H

Download SDF File 
Download CCD File 
A, B, C
2-(3-methyl-4-oxo-3,4-dihydrophthalazin-1-yl)-N-(6,7,8,9-tetrahydrodibenzo[b,d]furan-2-yl)acetamide
D67
C23 H21 N3 O3
GMQDVIPGHXODOQ-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
39HKi: 12 - 500 nM (98) BINDINGDB
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 83.130α = 90.00
b = 101.331β = 109.57
c = 87.267γ = 90.00
Software Package:
Software NamePurpose
MOLREPphasing
PHENIXrefinement
HKL-3000data reduction
HKL-3000data scaling
HKL-3000data collection
HKL-3000phasing
SBC-Collectdata collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-07-23
    Type: Initial release
  • Version 1.1: 2014-10-08
    Type: Structure summary
  • Version 1.2: 2017-08-02
    Type: Refinement description, Source and taxonomy
  • Version 1.3: 2018-01-24
    Type: Structure summary