4QKQ

RadA from Methanococcus Voltae in complex with copper phthalocyanine tetrasulfonate inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.267 
  • R-Value Work: 0.224 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of an archaeal Rad51 homolog in complex with a phthalocyanine tetrasulfonate inhibitor

Rao, D.E.C.S.Li, Y.He, Y.Luo, Y.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
DNA repair and recombination protein RadA
A, B, C, D, E, F, G, H, I, J, K, L
266Methanococcus voltaeMutation(s): 0 
Gene Names: radA
Find proteins for O73948 (Methanococcus voltae)
Go to UniProtKB:  O73948
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
35N
Query on 35N

Download SDF File 
Download CCD File 
G
Copper(II) tetrapyrrole
C16 H16 Cu N4
OETWXTGZUZOMCR-UHFFFAOYSA-N
 Ligand Interaction
NO3
Query on NO3

Download SDF File 
Download CCD File 
A, B, C, D, E, F, G, H, I, J, K, L
NITRATE ION
N O3
NHNBFGGVMKEFGY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.267 
  • R-Value Work: 0.224 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 111.000α = 112.30
b = 111.000β = 101.60
c = 112.400γ = 114.30
Software Package:
Software NamePurpose
CNSrefinement
HKL-2000data reduction
HKL-2000data scaling
PHASESphasing
HKL-2000data collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-06-10
    Type: Initial release
  • Version 1.1: 2015-06-24
    Type: Non-polymer description