Download MendeleyCrystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6
Lansky, S., Salama, R., Dann, R., Shner, I., Manjasetty, B., Belrhali, H., Shoham, Y., Shoham, G.To be published.
4QK0
Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6
- PDB DOI: https://doi.org/10.2210/pdb4QK0/pdb
- Classification: HYDROLASE
- Organism(s): Geobacillus stearothermophilus
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2014-06-05 Released: 2015-06-10
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.26 Å
- R-Value Free: 0.200
- R-Value Work: 0.157
- R-Value Observed: 0.160
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| GH127 beta-L-arabinofuranoside | A, B, C, D | 648 | Geobacillus stearothermophilus | Mutation(s): 0 Gene Names: araN |  |
UniProt | |||||
Find proteins for B3EYN9 (Geobacillus stearothermophilus) Explore B3EYN9 Go to UniProtKB: B3EYN9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B3EYN9 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.26 Å
- R-Value Free: 0.200
- R-Value Work: 0.157
- R-Value Observed: 0.160
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 105.383 | α = 90 |
| b = 132.266 | β = 113.06 |
| c = 109.045 | γ = 90 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| AutoSol | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2015-06-10 Deposition Author(s): Lansky, S., Salama, R., Dann, R., Shner, I., Manjasetty, B., Belrhali, H., Shoham, Y., Shoham, G.
Revision History (Full details and data files)
- Version 1.0: 2015-06-10
Type: Initial release
