4QI9

Crystal structure of dihydrofolate reductase from Yersinia pestis complexed with methotrexate


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.297 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.191 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of dihydrofolate reductase from Yersinia pestis complexed with methotrexate

Maltseva, N.Kim, Y.Makowska-Grzyska, M.Mulligan, R.Shatsman, S.Anderson, W.F.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Dihydrofolate reductase
A, B, C
167Yersinia pestisMutation(s): 0 
Gene Names: folA
EC: 1.5.1.3
Find proteins for A0A0H2W8H3 (Yersinia pestis)
Go to UniProtKB:  A0A0H2W8H3
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MTX
Query on MTX

Download SDF File 
Download CCD File 
A, B, C
METHOTREXATE
C20 H22 N8 O5
FBOZXECLQNJBKD-ZDUSSCGKSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 178.196α = 90.00
b = 103.641β = 93.00
c = 34.288γ = 90.00
Software Package:
Software NamePurpose
MOLREPphasing
SBC-Collectdata collection
PHENIXrefinement
HKL-3000phasing
HKL-3000data collection
HKL-3000data reduction
HKL-3000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-07-02
    Type: Initial release