4Q7Q

The crystal structure of a possible lipase from Chitinophaga pinensis DSM 2588


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.451 Å
  • R-Value Free: 0.190 
  • R-Value Work: 0.153 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

The crystal structure of a possible lipase from Chitinophaga pinensis DSM 2588

Tan, K.Tesar, C.Clancy, S.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Lipolytic protein G-D-S-L family
A, B
266Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)Mutation(s): 0 
Find proteins for C7PNH7 (Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034))
Go to UniProtKB:  C7PNH7
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FMT
Query on FMT

Download SDF File 
Download CCD File 
A, B
FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

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Download CCD File 
A, B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
PG4
Query on PG4

Download SDF File 
Download CCD File 
A
TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.451 Å
  • R-Value Free: 0.190 
  • R-Value Work: 0.153 
  • Space Group: P 43
Unit Cell:
Length (Å)Angle (°)
a = 80.611α = 90.00
b = 80.611β = 90.00
c = 93.005γ = 90.00
Software Package:
Software NamePurpose
DMmodel building
PHENIXrefinement
HKL-3000data reduction
MLPHAREphasing
ARPmodel building
HKL-3000phasing
WARPmodel building
SHELXDphasing
DMphasing
SBC-Collectdata collection
HKL-3000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-05-14
    Type: Initial release