4Q58

Crystal structure of the plectin 1a actin-binding domain/integrin beta 4 fragment complex

• PDB DOI: https://doi.org/10.2210/pdb4Q58/pdb

• Classification: STRUCTURAL PROTEIN/PROTEIN BINDING
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2014-04-16 Released: 2014-07-23 
• Deposition Author(s): Song, J.-G., Kostan, J., Grishkovskaya, I., Djinovic-Carugo, K.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 4.00 Å
• R-Value Free: 0.287 
• R-Value Work: 0.224 
• R-Value Observed: 0.227 

Literature

Crystal structure of the plectin 1a actin-binding domain/integrin beta 4 fragment complex

Song, J.-G., Kostan, J., Grishkovskaya, I., Djinovic-Carugo, K.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 2-mer - A1B1 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 generated by PISA (software)

Biological Assembly 3  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 3 generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 96.19 kDa 
• Atom Count: 6,619 
• Modelled Residue Count: 825 
• Deposited Residue Count: 842 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Plectin	A, B	226	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q15149 (Homo sapiens) Explore Q15149  Go to UniProtKB:  Q15149
PHAROS:  Q15149 GTEx:  ENSG00000178209

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Integrin beta-4	C, D	195	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for P16144 (Homo sapiens) Explore P16144  Go to UniProtKB:  P16144
PHAROS:  P16144 GTEx:  ENSG00000132470

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 4.00 Å
• R-Value Free: 0.287 
• R-Value Work: 0.224 
• R-Value Observed: 0.227 
• Space Group: P 6₅

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 96.341	α = 90
b = 96.341	β = 90
c = 208.025	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement

Structure Validation

Entry History 

Deposition Data

• Released Date: 2014-07-23 
Deposition Author(s): Song, J.-G., Kostan, J., Grishkovskaya, I., Djinovic-Carugo, K.

Revision History  

• Version 1.0: 2014-07-23
  Type: Initial release
  
• Version 1.1: 2024-02-28
  Changes: Data collection, Database references