4Q27

Galectin-1 in Complex with a Click-Activated N-Acetyllactosamine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.180 
  • R-Value Work: 0.151 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Galectin-1 in Complex with a Click-Activated N-Acetyllactosamine

Grimm, C.Bertleff-Zieschang, N.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Galectin-1
A, B
136Homo sapiensMutation(s): 0 
Gene Names: LGALS1
Find proteins for P09382 (Homo sapiens)
Go to Gene View: LGALS1
Go to UniProtKB:  P09382
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
2XV
Query on 2XV

Download SDF File 
Download CCD File 
A, B
prop-2-en-1-yl 2-(acetylamino)-2-deoxy-4-O-[3-O-(prop-2-yn-1-yl)-beta-D-galactopyranosyl]-beta-D-glucopyranoside
C20 H31 N O11
YZNUCYZMZVDRAM-MRHFAZSRSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
CME
Query on CME
A, B
L-PEPTIDE LINKINGC5 H11 N O3 S2CYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.180 
  • R-Value Work: 0.151 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 43.468α = 90.00
b = 58.130β = 90.00
c = 110.800γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata scaling
PHASERphasing
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-10-07
    Type: Initial release