4PSJ | pdb_00004psj

Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium (NESG) Target OR464.

• PDB DOI: https://doi.org/10.2210/pdb4PSJ/pdb

• Classification: DE NOVO PROTEIN
• Organism(s): synthetic construct
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2014-03-07 Released: 2014-03-26 
• Deposition Author(s): Vorobiev, S., Parmeggiani, F., Seetharaman, J., Huang, P.-S., Janjua, H., Xiao, R., Maglaqui, M., Park, K., Everett, J.K., Acton, T.B., Baker, D., Montelione, G.T., Tong, L., Hunt, J., Northeast Structural Genomics Consortium (NESG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.99 Å
• R-Value Free: 
  0.244 (Depositor), 0.240 (DCC) 
• R-Value Work: 
  0.181 (Depositor), 0.175 (DCC) 
• R-Value Observed: 
  0.184 (Depositor) 

Starting Model: experimental

Literature

Crystal Structure of Engineered Protein OR464.

Vorobiev, S., Parmeggiani, F., Seetharaman, J., Huang, P.-S., Janjua, H., Xiao, R., Maglaqui, M., Park, K., Everett, J.K., Acton, T.B., Baker, D., Montelione, G.T., Tong, L., Hunt, J.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 29.89 kDa 
• Atom Count: 2,155 
• Modeled Residue Count: 255 
• Deposited Residue Count: 271 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
OR464	A	271	synthetic construct	Mutation(s): 0

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.99 Å
• R-Value Free:  0.244 (Depositor), 0.240 (DCC) 
• R-Value Work:  0.181 (Depositor), 0.175 (DCC) 
• R-Value Observed: 0.184 (Depositor) 

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 31.916	α = 90
b = 51.455	β = 90.98
c = 69.005	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PDB_EXTRACT	data extraction
ADSC	data collection
HKL-2000	data reduction
HKL-2000	data scaling
BALBES	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2014-03-26 
Deposition Author(s): Vorobiev, S., Parmeggiani, F., Seetharaman, J., Huang, P.-S., Janjua, H., Xiao, R., Maglaqui, M., Park, K., Everett, J.K., Acton, T.B., Baker, D., Montelione, G.T., Tong, L., Hunt, J., Northeast Structural Genomics Consortium (NESG)

Revision History  

• Version 1.0: 2014-03-26
  Type: Initial release
  
• Version 1.1: 2023-09-20
  Changes: Data collection, Database references, Refinement description