4POK

Crystal structures of thioredoxin with mesna at 2.5A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.52 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.235 
  • R-Value Observed: 0.238 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

BNP7787 Forms Novel Covalent Adducts on Human Thioredoxin and Modulates Thioredoxin Activity

Parker, A.R.Nienaber, V.L.Petluru, P.N.Sridhar, V.Leverett, B.D.Ayala, P.Y.Zhao, M.Chie-Leon, B.Jair, K.Kochat, H.Badger, J.Hausheer, F.H.

(2014) J Pharmacol Clin Toxicol 2: 1026


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
ThioredoxinA, B, C, D109Homo sapiensMutation(s): 4 
Gene Names: TXNTRDXTRXTRX1
UniProt & NIH Common Fund Data Resources
Find proteins for P10599 (Homo sapiens)
Explore P10599 
Go to UniProtKB:  P10599
PHAROS:  P10599
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP10599
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
COM
Query on COM

Download Ideal Coordinates CCD File 
E [auth A]1-THIOETHANESULFONIC ACID
C2 H6 O3 S2
ZNEWHQLOPFWXOF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.52 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.235 
  • R-Value Observed: 0.238 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 124.516α = 90
b = 91.098β = 108.17
c = 57.676γ = 90
Software Package:
Software NamePurpose
HKL-2000data collection
PHASERphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2014-10-29
    Type: Initial release
  • Version 1.1: 2015-03-18
    Changes: Structure summary