4P1G

Crystal structure of the Bateman domain of murine magnesium transporter CNNM2 bound to AMP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free: 0.254 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.216 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structural and ligand binding properties of the Bateman domain of human magnesium transporters CNNM2 and CNNM4

Corral-Rodriguez, M.A.Stuiver, M.Abascal-Palacios, G.Diercks, T.Oyenarte, I.Ereno-Orbea, J.Encinar, J.A.Spiwok, V.Terashima, H.Accardi, A.Muller, D.Martinez-Cruz, L.A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Metal transporter CNNM2A152Mus musculusMutation(s): 0 
Gene Names: Cnnm2Acdp2
UniProt & NIH Common Fund Data Resources
Find proteins for Q3TWN3 (Mus musculus)
Explore Q3TWN3 
Go to UniProtKB:  Q3TWN3
IMPC:  MGI:2151054
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
AMP
Query on AMP

Download Ideal Coordinates CCD File 
B [auth A]ADENOSINE MONOPHOSPHATE
C10 H14 N5 O7 P
UDMBCSSLTHHNCD-KQYNXXCUSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free: 0.254 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.216 
  • Space Group: I 41 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 105.579α = 90
b = 105.579β = 90
c = 102.202γ = 90
Software Package:
Software NamePurpose
XDSdata scaling
PDB_EXTRACTdata extraction
PHENIXrefinement

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2015-03-04
    Type: Initial release
  • Version 1.1: 2017-11-22
    Changes: Data collection, Database references, Derived calculations, Other, Refinement description, Source and taxonomy