4P1D

Structure of the complex of a bimolecular human telomeric DNA with Coptisine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.232 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of the complex of a bimolecular human telomeric DNA with Coptisine

Ferraroni, M.Bazzicalupi, C.Gratteri, P.Bilia, A.R.Sissi, C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsLengthOrganism
telomeric DNAA,B12Homo sapiens
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
K
Query on K

Download SDF File 
Download CCD File 
A
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
 Ligand Interaction
KPT
Query on KPT

Download SDF File 
Download CCD File 
A
6,7-dihydro[1,3]dioxolo[4,5-g][1,3]dioxolo[7,8]isoquino[3,2-a]isoquinolin-5-ium
Coptisine
C19 H14 N O4
XYHOBCMEDLZUMP-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.232 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 41.567α = 90.00
b = 41.567β = 90.00
c = 66.157γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
REFMACrefinement
XDSdata reduction
PHASERphasing
XSCALEdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-03-18
    Type: Initial release
  • Version 1.1: 2017-09-27
    Type: Database references, Derived calculations, Other, Refinement description, Source and taxonomy