4P12

Native Structure of the P domain from a GI.7 Norovirus variant.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6011 Å
  • R-Value Free: 0.182 
  • R-Value Work: 0.155 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Structural analysis of determinants of histo-blood group antigen binding specificity in genogroup I noroviruses.

Shanker, S.Czako, R.Sankaran, B.Atmar, R.L.Estes, M.K.Prasad, B.V.

(2014) J.Virol. 88: 6168-6180


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Major capsid protein
A, B, C, D
301Norovirus Hu/GI.7/TCH-060/USA/2003Mutation(s): 0 
Find proteins for G8FL04 (Norovirus Hu/GI.7/TCH-060/USA/2003)
Go to UniProtKB:  G8FL04
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6011 Å
  • R-Value Free: 0.182 
  • R-Value Work: 0.155 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 62.181α = 99.51
b = 63.179β = 97.89
c = 90.470γ = 119.17
Software Package:
Software NamePurpose
HKL-2000data scaling
PHASERphasing
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical SciencesUnited States--
Howard Hughes Medical InstituteUnited States--

Revision History 

  • Version 1.0: 2014-04-02
    Type: Initial release
  • Version 1.1: 2014-05-21
    Type: Database references
  • Version 1.2: 2017-09-06
    Type: Advisory, Author supporting evidence, Database references, Derived calculations, Other, Source and taxonomy
  • Version 1.3: 2017-11-01
    Type: Author supporting evidence