4OZL

GlnK2 from Haloferax mediterranei complexed with AMP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4942 Å
  • R-Value Free: 0.184 
  • R-Value Work: 0.161 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The structure of a PII signaling protein from a halophilic archaeon reveals novel traits and high-salt adaptations.

Palanca, C.Pedro-Roig, L.Llacer, J.L.Camacho, M.Bonete, M.J.Rubio, V.

(2014) Febs J. 281: 3299-3314


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Nitrogen regulatory protein P-II
A
143Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)Mutation(s): 0 
Gene Names: glnK2
Find proteins for B8ZYW1 (Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4))
Go to UniProtKB:  B8ZYW1
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
AMP
Query on AMP

Download SDF File 
Download CCD File 
A
ADENOSINE MONOPHOSPHATE
C10 H14 N5 O7 P
UDMBCSSLTHHNCD-KQYNXXCUSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4942 Å
  • R-Value Free: 0.184 
  • R-Value Work: 0.161 
  • Space Group: H 3 2
Unit Cell:
Length (Å)Angle (°)
a = 89.090α = 90.00
b = 89.090β = 90.00
c = 95.260γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Spanish governmentSpainBFU2011_30407
Spanish governmentSpainBIO2008_00082
Valencian governmentSpainPrometeo 2009/51

Revision History 

  • Version 1.0: 2014-07-02
    Type: Initial release
  • Version 1.1: 2014-10-01
    Type: Database references