4OW2

YopM from Yersinia enterocolitica WA-314


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.181 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Immunosuppressive Yersinia Effector YopM Binds DEAD Box Helicase DDX3 to Control Ribosomal S6 Kinase in the Nucleus of Host Cells.

Berneking, L.Schnapp, M.Rumm, A.Trasak, C.Ruckdeschel, K.Alawi, M.Grundhoff, A.Kikhney, A.G.Koch-Nolte, F.Buck, F.Perbandt, M.Betzel, C.Svergun, D.I.Hentschke, M.Aepfelbacher, M.

(2016) PLoS Pathog. 12: e1005660-e1005660


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Yop effector YopM
A, B, C, D
448Yersinia enterocolitica subsp. enterocolitica WA-314Mutation(s): 0 
Find proteins for A0A0J9X1Z0 (Yersinia enterocolitica subsp. enterocolitica WA-314)
Go to UniProtKB:  A0A0J9X1Z0
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.181 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 210.847α = 90.00
b = 126.290β = 118.26
c = 139.933γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-03-04
    Type: Initial release
  • Version 1.1: 2015-08-05
    Type: Derived calculations
  • Version 1.2: 2018-03-07
    Type: Data collection, Derived calculations, Source and taxonomy
  • Version 1.3: 2019-03-13
    Type: Data collection, Database references