4ORO

Structure of Influenza B PB2 cap-binding domain complex with GDP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.199 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of Influenza B PB2 cap-binding domain complex with GDP

Liu, Y.Zheng, X.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Polymerase PB2
A, B, C, D
169Influenza B virusMutation(s): 0 
Find proteins for A0A0M3KKU8 (Influenza B virus)
Go to UniProtKB:  A0A0M3KKU8
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GDP
Query on GDP

Download SDF File 
Download CCD File 
A, B, C, D
GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.199 
  • Space Group: P 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 83.420α = 90.00
b = 42.771β = 90.08
c = 118.414γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data reduction
REFMACrefinement
HKL-2000data collection
MOLREPphasing
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2014-02-11 
  • Released Date: 2015-05-20 
  • Deposition Author(s): Liu, Y., Zheng, X.

Revision History 

  • Version 1.0: 2015-05-20
    Type: Initial release