4O3V

Crystal structure of a VirB8-like protein of type IV secretion system from Rickettsia typhi


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.189 
  • R-Value Work: 0.166 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Structural Insight into How Bacteria Prevent Interference between Multiple Divergent Type IV Secretion Systems.

Gillespie, J.J.Phan, I.Q.Scheib, H.Subramanian, S.Edwards, T.E.Lehman, S.S.Piitulainen, H.Rahman, M.S.Rennoll-Bankert, K.E.Staker, B.L.Taira, S.Stacy, R.Myler, P.J.Azad, A.F.Pulliainen, A.T.

(2015) MBio 6: e01867-e01815


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
VirB8-like protein of type IV secretion system
A, B
181Rickettsia typhi (strain ATCC VR-144 / Wilmington)Mutation(s): 0 
Find proteins for Q68X84 (Rickettsia typhi (strain ATCC VR-144 / Wilmington))
Go to UniProtKB:  Q68X84
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SRT
Query on SRT

Download SDF File 
Download CCD File 
B
S,R MESO-TARTARIC ACID
C4 H6 O6
FEWJPZIEWOKRBE-XIXRPRMCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 117.680α = 90.00
b = 117.680β = 90.00
c = 83.820γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement
XDSdata reduction
PDB_EXTRACTdata extraction
XSCALEdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-03-05
    Type: Initial release
  • Version 1.1: 2015-12-16
    Type: Database references
  • Version 1.2: 2016-03-23
    Type: Database references
  • Version 1.3: 2016-06-29
    Type: Database references