4O2W

Crystal structure of the third RCC1-like domain of HERC1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.221 
  • R-Value Work: 0.181 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of the third RCC1-like domain of HERC1

Hu, J.Dong, A.Li, Y.Walker, J.R.Bountra, C.Arrowsmith, C.H.Edwards, A.M.Tong, Y.Structural Genomics Consortium (SGC)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
E3 ubiquitin-protein ligase HERC1
A, B, C, D
404Homo sapiensMutation(s): 0 
Gene Names: HERC1
EC: 2.3.2.26
Find proteins for Q15751 (Homo sapiens)
Go to Gene View: HERC1
Go to UniProtKB:  Q15751
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

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Download CCD File 
A, D
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
UNX
Query on UNX

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Download CCD File 
A, B, C, D
UNKNOWN ATOM OR ION
X
*
 Ligand Interaction
MG
Query on MG

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Download CCD File 
A, B, D
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.221 
  • R-Value Work: 0.181 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 53.383α = 70.93
b = 70.902β = 81.26
c = 105.549γ = 90.84
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
HKL-3000data scaling
SBC-Collectdata collection
Cootmodel building
PHASERphasing
HKL-3000data reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-01-15
    Type: Initial release