4O2I

The crystal structure of non-LEE encoded type III effector C from Citrobacter rodentium


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.168 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The crystal structure of non-LEE encoded type III effector C from Citrobacter rodentium

Chang, C.Xu, X.Cui, H.Savchenko, A.Adkins, J.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Non-LEE encoded type III effector C
A, B
324Citrobacter rodentiumMutation(s): 0 
Gene Names: nleC
Find proteins for Q6RYA8 (Citrobacter rodentium)
Go to UniProtKB:  Q6RYA8
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A, B
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.168 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 73.937α = 90.00
b = 89.356β = 90.00
c = 205.416γ = 90.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
MLPHAREphasing
PDB_EXTRACTdata extraction
DMphasing
REFMACrefinement
ARP/wARPmodel building
Cootmodel building
HKL-3000phasing
HKL-3000data reduction
SBC-Collectdata collection
SHELXDEphasing
RESOLVEphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2014-01-15
    Type: Initial release
  • Version 1.1: 2014-05-07
    Type: Structure summary