4NVT

Crystal Structure of Triosephosphate Isomerase from Brucella melitensis

PDB DOI: https://doi.org/10.2210/pdb4NVT/pdb

Classification: ISOMERASE
Organism(s): Brucella melitensis ATCC 23457
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2013-12-05 Released: 2013-12-18
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.10 Å
R-Value Free: 0.230
R-Value Work: 0.176
R-Value Observed: 0.179

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal Structure of Triosephosphate Isomerase from Brucella melitensis

Lukacs, C.M., Fairman, J.W., Edwards, T.E., Lorimer, D.

To be published.

Macromolecule Content

Total Structure Weight: 110.19 kDa
Atom Count: 7,636
Modelled Residue Count: 989
Deposited Residue Count: 1,048
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Triosephosphate isomerase	A, B, C, D	262	Brucella melitensis ATCC 23457	Mutation(s): 0 Gene Names: BMEA_A1182, tpiA EC: 5.3.1.1
UniProt
Find proteins for C0RJA8 (Brucella melitensis biotype 2 (strain ATCC 23457)) Explore C0RJA8 Go to UniProtKB: C0RJA8
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	C0RJA8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.10 Å
R-Value Free: 0.230
R-Value Work: 0.176
R-Value Observed: 0.179
Space Group: P 1
Diffraction Data: https://doi.org/10.18430/M34NVT

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 51.91	α = 104.57
b = 60.6	β = 99.46
c = 86.17	γ = 90.31

Software Package:

Software Name	Purpose
PHASER	phasing
REFMAC	refinement
XDS	data reduction
XSCALE	data scaling

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2013-12-18

Deposition Author(s):

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History (Full details and data files)

Version 1.0: 2013-12-18
Type: Initial release
Version 1.1: 2023-09-20
Changes: Data collection, Database references, Refinement description

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.