Download MendeleyCrystal structure of ESTERASE B from Lactobacillus Rhamnosis (HN001)
Bennett, M.D., Anderson, B.F., Norris, G.E., Delabre, M.-L., Smith, C.A.To be published.
4N5H
Crystal structure of ESTERASE B from Lactobacillus Rhamnosis (HN001)
- PDB DOI: https://doi.org/10.2210/pdb4N5H/pdb
- Classification: HYDROLASE
- Organism(s): Lacticaseibacillus rhamnosus Lc 705
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2013-10-09 Released: 2014-10-15
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.71 Å
- R-Value Free: 0.174
- R-Value Work: 0.139
- R-Value Observed: 0.140
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Esterase/lipase | A [auth X] | 317 | Lacticaseibacillus rhamnosus Lc 705 | Mutation(s): 1 Gene Names: LC705_02872, LRH_10360 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| IPA Query on IPA | B [auth X], C [auth X], D [auth X] | ISOPROPYL ALCOHOL C3 H8 O KFZMGEQAYNKOFK-UHFFFAOYSA-N |  | ||
| CA Query on CA | F [auth X] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
| CL Query on CL | E [auth X] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.71 Å
- R-Value Free: 0.174
- R-Value Work: 0.139
- R-Value Observed: 0.140
- Space Group: I 4
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 109.502 | α = 90 |
| b = 109.502 | β = 90 |
| c = 59.433 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CrystalClear | data collection |
| MOLREP | phasing |
| REFMAC | refinement |
| CrystalClear | data reduction |
| CrystalClear | data scaling |
Entry History
Deposition Data
- Released Date: 2014-10-15 Deposition Author(s): Bennett, M.D., Holland, R., Loo, T.S., Smith, C.A., Norris, G.E., Delabre, M.-L., Anderson, B.F.
Revision History (Full details and data files)
- Version 1.0: 2014-10-15
Type: Initial release - Version 1.1: 2024-02-28
Changes: Data collection, Database references, Derived calculations - Version 1.2: 2024-04-03
Changes: Refinement description
