4MX8

Crystal Structure of TroA-like Periplasmic Binding Protein Peripla_BP_2 from Xylanimonas cellulosilytica


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.911 Å
  • R-Value Free: 0.196 
  • R-Value Work: 0.159 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal Structure of TroA-like Periplasmic Binding Protein Peripla_BP_2 from Xylanimonas cellulosilytica

Kim, Y.Wu, R.Endres, M.Joachimiak, A.Midwest Center for Structural Genomics (MCSG)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Periplasmic binding protein
A, B, C, D, E, F
315Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07)Mutation(s): 0 
Find proteins for D1BRG9 (Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07))
Go to UniProtKB:  D1BRG9
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D, E, F
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.911 Å
  • R-Value Free: 0.196 
  • R-Value Work: 0.159 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 201.663α = 90.00
b = 116.547β = 112.19
c = 177.158γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
RESOLVEmodel building
RESOLVEphasing
HKL-3000phasing
HKL-3000data scaling
SBC-Collectdata collection
BUCCANEERmodel building
HKL-3000data collection
BUCCANEERphasing
SOLVEphasing
SHELXSphasing
MLPHAREphasing
HKL-3000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-12-11
    Type: Initial release