4MTN

Crystal structure of transcription termination factor NusA from Planctomyces limnophilus DSM 3776


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.579 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.222 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of transcription termination factor NusA from Planctomyces limnophilus DSM 3776

Chang, C.Hatzos-Skintges, C.Clancy, S.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Transcription termination factor NusA
A
407Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)Mutation(s): 0 
Gene Names: nusA
Find proteins for D5SQ09 (Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290))
Go to UniProtKB:  D5SQ09
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.579 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.222 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 162.026α = 90.00
b = 54.065β = 110.69
c = 62.859γ = 90.00
Software Package:
Software NamePurpose
DMphasing
REFMACrefinement
Cootmodel building
SBC-Collectdata collection
PDB_EXTRACTdata extraction
PHENIXrefinement
MLPHAREphasing
HKL-3000data reduction
HKL-3000data scaling
HKL-3000phasing
SHELXDEphasing
ARP/wARPmodel building
RESOLVEphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-10-02
    Type: Initial release
  • Version 1.1: 2017-11-15
    Type: Refinement description
  • Version 1.2: 2019-07-17
    Type: Data collection, Derived calculations, Refinement description