Biological Assembly 1  

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Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 3967.03 
• Atom Count: 256 
• Residue Count: 10 
• Unique nucleic acid chains: 1

4MS5

Lambda-[Ru(TAP)2(dppz-11,12-(F)2)]2+ bound to CCGGATCCGG

• DOI: 10.2210/pdb4MS5/pdb
• NDB: NA2735

• Classification: DNA


• Deposited: 2013-09-18 Released: 2014-10-08 
• Deposition Author(s): Hall, J.P., Cardin, C.J.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.23 Å
• R-Value Free: 0.245 
• R-Value Work: 0.219 

Literature

The effects of disubstitution on the binding of ruthenium complexes to DNA

Hall, J.P.

(2014) Thesis, University of Reading --: --

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Length	Organism
DNA	A	10	N/A

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions
RKF	A	(11,12-difluorodipyrido[3,2-a:2',3'-c]phenazine-kappa~2~N~4~,N~5~)[bis(pyrazino[2,3-f]quinoxaline-kappa~2~N~1~,N~10~)]ruthenium(2+) C38 H20 F2 N12 Ru DYCZIOAIFCZYGH-UHFFFAOYSA-N
BA	A	BARIUM ION Ba XDFCIPNJCBUZJN-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.23 Å
• R-Value Free: 0.245 
• R-Value Work: 0.219 
• Space Group: P 4₃ 2₁ 2

Unit Cell:

Length (Å)	Angle (°)
a = 47.610	α = 90.00
b = 47.610	β = 90.00
c = 34.600	γ = 90.00

Software Package:

Software Name	Purpose
PHASER	phasing
Aimless	data scaling
XDS	data reduction
GDA	data collection
REFMAC	refinement

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2013-09-18 
• Released Date: 2014-10-08 
• Deposition Author(s): Hall, J.P., Cardin, C.J.

Revision History 

• Version 1.0: 2014-10-08
  Type: Initial release
• Version 1.1: 2017-03-08
  Type: Database references