4MGI

Selective activation of Epac1 and Epac2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.271 
  • R-Value Work: 0.249 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Selective activation of Epac1 and Epac2

Rehmann, H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Rap guanine nucleotide exchange factor 4
E
694Mus musculusMutation(s): 0 
Gene Names: Rapgef4 (Cgef2, Epac2)
Find proteins for Q9EQZ6 (Mus musculus)
Go to UniProtKB:  Q9EQZ6
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Ras-related protein Rap-1b
R
167Homo sapiensMutation(s): 0 
Gene Names: RAP1B
Find proteins for P61224 (Homo sapiens)
Go to Gene View: RAP1B
Go to UniProtKB:  P61224
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
R
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
CMP
Query on CMP

Download SDF File 
Download CCD File 
E
ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
CYCLIC AMP; CAMP
C10 H12 N5 O6 P
IVOMOUWHDPKRLL-KQYNXXCUSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
CMPIC50: 40000 - 48000 nM (97) BINDINGDB
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.271 
  • R-Value Work: 0.249 
  • Space Group: I 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 125.318α = 90.00
b = 148.497β = 90.00
c = 224.720γ = 90.00
Software Package:
Software NamePurpose
ADSCdata collection
MOLREPphasing
XDSdata reduction
REFMACrefinement
XSCALEdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2013-08-28 
  • Released Date: 2014-09-03 
  • Deposition Author(s): Rehmann, H.

Revision History 

  • Version 1.0: 2014-09-03
    Type: Initial release
  • Version 1.1: 2017-11-15
    Type: Refinement description