4MDC

Crystal structure of glutathione S-transferase from Sinorhizobium meliloti 1021, NYSGRC target 021389


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.78 Å
  • R-Value Free: 0.190 
  • R-Value Work: 0.161 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of glutathione S-transferase from Sinorhizobium meliloti 1021

Shabalin, I.G.Bacal, P.Cooper, D.R.Stead, M.Ahmed, M.Hammonds, J.Bonanno, J.Seidel, R.Almo, S.C.Minor, W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative glutathione S-transferase
A, B, C, D
252Rhizobium meliloti (strain 1021)Mutation(s): 0 
Gene Names: gst4
EC: 2.5.1.18
Find proteins for Q92SP3 (Rhizobium meliloti (strain 1021))
Go to UniProtKB:  Q92SP3
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A, B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 182.181α = 90.00
b = 53.508β = 115.88
c = 111.123γ = 90.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
HKL-3000data scaling
SOLVEphasing
DMphasing
HKL-3000data collection
MLPHAREphasing
PDB_EXTRACTdata extraction
HKL-3000data reduction
HKL-3000phasing
RESOLVEphasing
REFMACrefinement
SHELXphasing
SHELXDphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-09-04
    Type: Initial release