4MBQ | pdb_00004mbq

TPR3 of FimV from P. aeruginosa (PAO1)

PDB DOI: https://doi.org/10.2210/pdb4MBQ/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Pseudomonas aeruginosa PAO1
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2013-08-19 Released: 2014-08-20
Deposition Author(s): Nguyen, Y., Zhang, K., Daniel-Ivad, M., Robinson, H., Wolfram, F., Sugiman-Marangos, S.N., Junop, M.S., Burrows, L.L., Howell, P.L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.01 Å
R-Value Free:
0.258 (Depositor), 0.260 (DCC)
R-Value Work:
0.208 (Depositor), 0.210 (DCC)
R-Value Observed:
0.213 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Crystal structure of TPR2 from FimV

Daniel-Ivad, M., Nguyen, Y., Zhang, K., Buensuceso, R., Robinson, H., Wolfram, F., Sugiman-Marangos, S.N., Junop, M.S., Howell, P.L., Burrows, L.L.

To be published.

Macromolecule Content

Total Structure Weight: 41.71 kDa
Atom Count: 2,244
Modeled Residue Count: 301
Deposited Residue Count: 384
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Motility protein FimV	A, B, C, D, E A, B, C, D, E, F	64	Pseudomonas aeruginosa PAO1	Mutation(s): 0 Gene Names: fimV, PA3115
UniProt
Find proteins for Q9HZA6 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9HZA6 Go to UniProtKB: Q9HZA6
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9HZA6
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.01 Å
R-Value Free: 0.258 (Depositor), 0.260 (DCC)
R-Value Work: 0.208 (Depositor), 0.210 (DCC)
R-Value Observed: 0.213 (Depositor)

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 34.026	α = 90
b = 58.514	β = 90
c = 136.695	γ = 90

Software Package:

Software Name	Purpose
CBASS	data collection
PHENIX	model building
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHENIX	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2014-08-20

Deposition Author(s):

Daniel-Ivad, M.

Sugiman-Marangos, S.N.

Revision History (Full details and data files)

Version 1.0: 2014-08-20
Type: Initial release
Version 1.1: 2016-02-24
Changes: Structure summary
Version 1.2: 2024-02-28
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.