4M3K

Structure of a single domain camelid antibody fragment cAb-H7S in complex with the BlaP beta-lactamase from Bacillus licheniformis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.48 Å
  • R-Value Free: 0.195 
  • R-Value Work: 0.161 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Probing the mechanism of aggregation of polyQ model proteins with camelid heavy-chain antibody fragments

Pain, C.Cosolo, A.Preumont, S.Scarafone, N.Thorn, D.Herman, R.Spiegel, H.Pardon, E.Matagne, A.Charlier, P.Steyaert, J.Damblon, C.Kerff, F.Esposito, G.Dumoulin, M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Beta-lactamase
A
273Bacillus licheniformisMutation(s): 0 
Gene Names: penP (blaP)
EC: 3.5.2.6
Find proteins for P00808 (Bacillus licheniformis)
Go to UniProtKB:  P00808
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Camelid heavy-chain antibody variable fragment cAb-H7S
B
126N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A, B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.48 Å
  • R-Value Free: 0.195 
  • R-Value Work: 0.161 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 51.818α = 90.00
b = 42.940β = 105.29
c = 74.818γ = 90.00
Software Package:
Software NamePurpose
XDSdata reduction
PHASERphasing
REFMACrefinement
XDSdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-08-06
    Type: Initial release