4LZH

L,D-transpeptidase from Klebsiella pneumoniae


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.179 
  • R-Value Work: 0.151 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

L,D-transpeptidase from Klebsiella pneumoniae.

Osipiuk, J.Hatzos-Skintges, C.Endres, M.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
L,D-transpeptidase
A
285Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)Gene Names: ybiS
Find proteins for A6T6R4 (Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578))
Go to UniProtKB:  A6T6R4
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 150.746α = 90.00
b = 150.746β = 90.00
c = 43.067γ = 120.00
Software Package:
Software NamePurpose
SOLVEphasing
DMphasing
RESOLVEphasing
PDB_EXTRACTdata extraction
SBC-Collectdata collection
MLPHAREphasing
HKL-2000data scaling
SCALEPACKdata scaling
DENZOdata reduction
SHELXDphasing
HKL-3000phasing
HKL-3000data reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-08-21
    Type: Initial release
  • Version 1.1: 2017-11-15
    Type: Refinement description