4LMQ

Development and Preclinical Characterization of a Humanized Antibody Targeting CXCL12


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.773 Å
  • R-Value Free: 0.301 
  • R-Value Work: 0.253 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Development and Preclinical Characterization of a Humanized Antibody Targeting CXCL12.

Zhong, C.Wang, J.Li, B.Xiang, H.Ultsch, M.Coons, M.Wong, T.Chiang, N.Y.Clark, S.Clark, R.Quintana, L.Gribling, P.Suto, E.Barck, K.Corpuz, R.Yao, J.Takkar, R.Lee, W.P.Damico-Beyer, L.A.Carano, R.D.Adams, C.Kelley, R.F.Wang, W.Ferrara, N.

(2013) Clin.Cancer Res. 19: 4433-4445


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Stromal cell-derived factor 1
D, F
61Homo sapiensMutation(s): 0 
Gene Names: CXCL12 (SDF1, SDF1A, SDF1B)
Find proteins for P48061 (Homo sapiens)
Go to Gene View: CXCL12
Go to UniProtKB:  P48061
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
immunoglobulin G1 heavy chain
E, H
221N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Stromal cell-derived factor 1
I, L
214N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.773 Å
  • R-Value Free: 0.301 
  • R-Value Work: 0.253 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 64.949α = 90.00
b = 73.101β = 90.40
c = 106.626γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
PHASERphasing
SCALAdata scaling
XDSdata reduction
Blu-Icedata collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2013-08-14
    Type: Initial release
  • Version 1.1: 2013-08-28
    Type: Database references
  • Version 1.2: 2018-01-24
    Type: Structure summary