4L6E

Crystal Structure of the RanBD1 fourth domain of E3 SUMO-protein ligase RanBP2. Northeast Structural Genomics Consortium (NESG) Target HR9193b


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.198 

wwPDB Validation 3D Report Full Report



Literature

Crystal Structure of the RanBD1 fourth domain of E3 SUMO-protein ligase RanBP2.

Vorobiev, S.Su, M.Seetharaman, J.Mao, L.Xiao, R.Maglaqui, M.Kogan, S.Wang, H.Everett, J.K.Acton, T.B.Montelione, G.T.Hunt, J.F.Tong, L.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
E3 SUMO-protein ligase RanBP2A155Homo sapiensMutation(s): 0 
Gene Names: NUP358RANBP2
EC: 6.3.2 (PDB Primary Data), 5.2.1.8 (PDB Primary Data), 2.3.2 (UniProt)
Find proteins for P49792 (Homo sapiens)
Explore P49792 
Go to UniProtKB:  P49792
NIH Common Fund Data Resources
PHAROS  P49792
Protein Feature View
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
AL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.198 
  • Space Group: P 61 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 69.481α = 90
b = 69.481β = 90
c = 152.55γ = 120
Software Package:
Software NamePurpose
PHENIXrefinement
PDB_EXTRACTdata extraction
ADSCdata collection
HKL-2000data reduction
HKL-2000data scaling
AutoSolphasing

Structure Validation

View Full Validation Report



Entry History 

Revision History 

  • Version 1.0: 2013-06-26
    Type: Initial release