4KTY

Fibrin-stabilizing factor with a bound ligand


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free: 0.206 
  • R-Value Work: 0.169 
  • R-Value Observed: 0.171 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structure of Active Coagulation Factor XIII Triggered by Calcium Binding: Basis for the Design of Next-Generation Anticoagulants.

Stieler, M.Weber, J.Hils, M.Kolb, P.Heine, A.Buchold, C.Pasternack, R.Klebe, G.

(2013) Angew Chem Int Ed Engl 52: 11930-11934


Macromolecules
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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Coagulation factor XIII A chain AB738Homo sapiensMutation(s): 2 
Gene Names: F13AF13A1
EC: 2.3.2.13
Find proteins for P00488 (Homo sapiens)
Explore P00488 
Go to UniProtKB:  P00488
NIH Common Fund Data Resources
PHAROS:  P00488
Protein Feature View
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  • Reference Sequence
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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Peptide-like ligand CD9N/AMutation(s): 0 
Protein Feature View
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  • Reference Sequence
Biologically Interesting Molecules (External Reference) 1 Unique
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free: 0.206 
  • R-Value Work: 0.169 
  • R-Value Observed: 0.171 
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 56.761α = 88.14
b = 80.51β = 76.7
c = 102.844γ = 82.01
Software Package:
Software NamePurpose
MAR345dtbdata collection
PHASERphasing
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-12-04
    Type: Initial release
  • Version 1.1: 2014-03-12
    Changes: Database references