4JV3

Crystal structure of beta-ketoacyl synthase from Brucella melitensis in complex with platencin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.169 
  • R-Value Work: 0.142 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of beta-ketoacyl synthase from Brucella melitensis in complex with platencin

Abendroth, J.Fairman, J.W.Lorimer, D.Edwards, T.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Beta-ketoacyl synthase
A
428Brucella abortus (strain 2308)Gene Names: fabB
EC: 2.3.1.41
Find proteins for Q2YQQ9 (Brucella abortus (strain 2308))
Go to UniProtKB:  Q2YQQ9
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
N32
Query on N32

Download SDF File 
Download CCD File 
A
2,4-dihydroxy-3-({3-[(2S,4aS,8S,8aR)-8-methyl-3-methylidene-7-oxo-1,3,4,7,8,8a-hexahydro-2H-2,4a-ethanonaphthalen-8-yl]propanoyl}amino)benzoic acid
Platencin
C24 H27 N O6
DWUHGPPFFABTIY-RLWZQHMASA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
CSU
Query on CSU
A
L-PEPTIDE LINKINGC3 H7 N O5 S2CYS
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 78.160α = 90.00
b = 84.480β = 120.81
c = 74.020γ = 90.00
Software Package:
Software NamePurpose
XSCALEdata scaling
XDSdata reduction
PDB_EXTRACTdata extraction
JDirectordata collection
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-05-22
    Type: Initial release
  • Version 1.1: 2013-06-05
    Type: Structure summary