4JUL

Crystal structure of H5N1 influenza virus hemagglutinin, clade 2.3.4


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7927 Å
  • R-Value Free: 0.254 
  • R-Value Work: 0.196 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Hemagglutinin HA1
A, C, E, H, J, L
329Influenza A virusMutation(s): 0 
Gene Names: HA
Find proteins for Q00G25 (Influenza A virus)
Go to UniProtKB:  Q00G25
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Hemagglutinin HA2
B, D, F, I, K, M
182Influenza A virusMutation(s): 0 
Gene Names: HA
Find proteins for Q00G25 (Influenza A virus)
Go to UniProtKB:  Q00G25
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAG
Query on NAG

Download SDF File 
Download CCD File 
A, C, E, H, J, L
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7927 Å
  • R-Value Free: 0.254 
  • R-Value Work: 0.196 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 71.584α = 83.94
b = 71.557β = 85.46
c = 247.054γ = 60.68
Software Package:
Software NamePurpose
HKL-2000data reduction
PHENIXrefinement
PDB_EXTRACTdata extraction
HKL-2000data collection
PHASERphasing
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-05-07
    Type: Initial release