4JL3

Crystal structure of ms6564-dna complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.280 
  • R-Value Work: 0.224 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural basis for interaction between M. smegmatis Ms6564, a TetR family master regulator, and its target DNA.

Yang, S.F.Gao, Z.Q.He, Z.G.Dong, Y.H.

(2013) J.Biol.Chem. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Transcriptional regulator, TetR family
A, B, C, D
196Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)N/A
Find proteins for A0R6I8 (Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
Go to UniProtKB:  A0R6I8
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (31-MER)E31N/A
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (31-MER)F31N/A
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.280 
  • R-Value Work: 0.224 
  • Space Group: P 31
Unit Cell:
Length (Å)Angle (°)
a = 100.954α = 90.00
b = 100.954β = 90.00
c = 99.856γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
SOLVEphasing
Blu-Icedata collection
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-06-26
    Type: Initial release