4JHM

Crystal structure of a putative mandelate racemase/muconate lactonizing enzyme from Pseudovibrio sp.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.194 
  • R-Value Observed: 0.197 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal structure of a putative mandelate racemase/muconate lactonizing enzyme from Pseudovibrio sp.

Hegde, R.P.Toro, R.Burley, S.K.Almo, S.C.Ramagopal, U.A.New York Structural Genomics Research Consortium (NYSGRC)

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein
A, B, C, D, E, F, G, H
A, B, C, D, E, F, G, H
384Pseudovibrio sp. JE062Mutation(s): 0 
Gene Names: PJE062_89PJE062_892
UniProt
Find proteins for B6R2Z8 (Pseudovibrio sp. JE062)
Explore B6R2Z8 
Go to UniProtKB:  B6R2Z8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupB6R2Z8
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D, E, F, G, H
A, B, C, D, E, F, G, H
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.194 
  • R-Value Observed: 0.197 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 201.793α = 90
b = 117.313β = 99.77
c = 143.127γ = 90
Software Package:
Software NamePurpose
SCALAdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
CBASSdata collection
MOSFLMdata reduction
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-05-01
    Type: Initial release
  • Version 1.1: 2013-05-08
    Changes: Other
  • Version 1.2: 2021-02-10
    Changes: Database references, Derived calculations, Structure summary