4JGJ

Crystal structure of the Ig-like D1 domain from mouse Carcinoembryogenic antigen-related cell adhesion molecule 15 (CEACAM15) [PSI-NYSGRC-005691]


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6508 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.195 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of the Ig-like D1 domain of CEACAM15 from Mus musculus [NYSGRC-005691]

Kumar, P.R.Bonanno, J.Nathenson, S.G.Almo, S.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Carcinoembryonic antigen-related cell adhesion molecule 15
A, B
126Mus musculusMutation(s): 0 
Gene Names: Ceacam15
Find proteins for A0A0B4J1L0 (Mus musculus)
Go to UniProtKB:  A0A0B4J1L0
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Unknown peptide
X, Y
8N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAG
Query on NAG

Download SDF File 
Download CCD File 
A, B
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
UNK
Query on UNK
X, Y
L-PEPTIDE LINKINGC4 H9 N O2

--

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6508 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.195 
  • Space Group: H 3
Unit Cell:
Length (Å)Angle (°)
a = 101.168α = 90.00
b = 101.168β = 90.00
c = 75.729γ = 120.00
Software Package:
Software NamePurpose
CBASSdata collection
PHENIXphasing
PDB_EXTRACTdata extraction
SCALEPACKdata scaling
HKL-2000data reduction
PHENIXrefinement
DENZOdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2013-03-13
    Type: Initial release
  • Version 1.1: 2013-11-27
    Type: Structure summary
  • Version 1.2: 2017-11-15
    Type: Refinement description