4JE1

Crystal structure of thiol peroxidase from BURKHOLDERIA CENOCEPACIA J2315


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.40 Å
  • R-Value Free: 0.171 
  • R-Value Work: 0.151 
  • R-Value Observed: 0.152 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal structure of thiol peroxidase from BURKHOLDERIA CENOCEPACIA J2315

SSGCIDDavies, D.R.Abendroth, J.A.Clifton, M.C.Edwards, T.Lorimer, D.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Probable thiol peroxidase
A, B
175Burkholderia cenocepacia J2315Mutation(s): 0 
Gene Names: tpxBceJ2315_33620BCAL3424
EC: 1.11.1 (PDB Primary Data), 1.11.1.24 (UniProt)
UniProt
Find proteins for B4E5V4 (Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610))
Explore B4E5V4 
Go to UniProtKB:  B4E5V4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupB4E5V4
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download Ideal Coordinates CCD File 
C [auth B]1,2-ETHANEDIOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.40 Å
  • R-Value Free: 0.171 
  • R-Value Work: 0.151 
  • R-Value Observed: 0.152 
  • Space Group: P 1
  • Diffraction Data: https://doi.org/10.18430/M34JE1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 38.91α = 88.13
b = 44.29β = 101.34
c = 53.08γ = 115.1
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-03-20
    Type: Initial release
  • Version 1.1: 2016-05-25
    Changes: Database references