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Download EndnoteCrystal structure of the ABL-SH3 domain complexed with the designed high-affinity peptide ligand P7
Camara-Artigas, A.To be published.
4J9G
Crystal structure of the ABL-SH3 domain complexed with the designed high-affinity peptide ligand P7 at pH7
- DOI: 10.2210/pdb4J9G/pdb
- Classification: Transferase/unknown function
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Deposited: 2013-02-16 Released: 2014-01-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.8 Å
- R-Value Free: 0.244
- R-Value Work: 0.206
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Tyrosine-protein kinase ABL1 | A, C, E | 63 | Homo sapiens | Mutation(s): 0 Gene Names: ABL1 (ABL, JTK7) EC: 2.7.10.2 |
Find proteins for P00519 (Homo sapiens) Go to Gene View: ABL1 Go to UniProtKB: P00519 | ||||
Entity ID: 2 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| P7 | B, D, F | 11 | N/A | Mutation(s): 0 |
| Protein Feature View is not available: No corresponding UniProt sequence found. | ||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | E | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | Ligand Interaction | |
| GOL Query on GOL | E | GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| ACE Query on ACE | B, D, F | NON-POLYMER | C2 H4 O |  | -- |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.8 Å
- R-Value Free: 0.244
- R-Value Work: 0.206
- Space Group: P 32 2 1
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 86.309 | α = 90.00 |
| b = 86.309 | β = 90.00 |
| c = 45.236 | γ = 120.00 |
| Software Name | Purpose |
|---|---|
| PDB_EXTRACT | data extraction |
| Aimless | data scaling |
| PHENIX | refinement |
| ADSC | data collection |
| XDS | data reduction |
| PHASER | phasing |
Entry History
Deposition Data
- Deposited Date: 2013-02-16
- Released Date: 2014-01-29
- Deposition Author(s): Camara-Artigas, A.
Revision History
- Version 1.0: 2014-01-29
Type: Initial release
