4J4L

Modular evolution and design of the protein binding interface


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.268 
  • R-Value Work: 0.205 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Modular evolution and design of the protein binding interface

Lee, J.Kim, H.J.Yang, C.Choi, J.Kyeong, H.Yuk, J.Park, K.Kim, Y.J.Heu, W.Lee, S.Kim, D.Jo, E.K.Cheong, H.K.Kim, H.S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Internalin B,REPEAT MODULES,Variable lymphocyte receptor B
A, B
267Eptatretus burgeriListeria monocytogenes
This entity is chimeric
Mutation(s): 0 
Gene Names: VLRB,
Find proteins for Q4G1L3 (Eptatretus burgeri)
Go to UniProtKB:  Q4G1L3
Find proteins for A4L9V2 (Listeria monocytogenes)
Go to UniProtKB:  A4L9V2
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Interleukin-6
C, D
168Homo sapiensMutation(s): 0 
Gene Names: IL6 (IFNB2)
Find proteins for P05231 (Homo sapiens)
Go to Gene View: IL6
Go to UniProtKB:  P05231
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.268 
  • R-Value Work: 0.205 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 46.319α = 90.00
b = 134.001β = 90.00
c = 148.722γ = 90.00
Software Package:
Software NamePurpose
ADSCdata collection
CNSphasing
MOSFLMdata reduction
CNSrefinement
SCALAdata scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-02-12
    Type: Initial release
  • Version 1.1: 2017-06-07
    Type: Database references, Source and taxonomy